Raekoja plats 9, III korrus 51004 Tartu linn, Tartu linn, Tartumaa EST
Publikatsioonid
01.12.2021
Loodusressursside õppetool
Viimase viie aasta teadus- ja populaarteaduslikud populatsioonid.
Teaduspublikatsioonid
Kaasiku, T., Rannap, R., Männil, P. (2022). Predation-mediated edge effects reduce survival of wader nests at a wet grassland-forest edge. Animal Conservation. https://doi.org/10.1111/acv.12774
Java, O.; Kohv, M.; Lõhmus, A. (2021). Performance of a Bog Hydrological System Dynamics Simulation Model in an Ecological Restoration Context: Soomaa Case Study, Estonia. Water, 13 (16), 2217. DOI: 10.3390/w13162217.
Kaasiku, Triin; Praks, Jaan; Jakobson, Kaidi; Rannap, Riinu (2021). Radar remote sensing as a novel tool to assess the performance of an agri-environment scheme in coastal grasslands. Basic and Applied Ecology. DOI: 10.1016/j.baae.2021.07.002.
Kõrkjas, M.; Remm, L.; Lõhmus, A. (2021). Tree-related microhabitats on live Populus tremula and Picea abies in relation to tree age, diameter, and stand factors in Estonia. European Journal of Forest Research, 140. DOI: 10.1007/s10342-021-01396-7.
Kõrkjas, Maarja; Remm, Liina; Lõhmus, Asko (2021). Development rates and persistence of the microhabitats initiated by disease and injuries in live trees: A review. Forest Ecology and Management, 482, 118833. DOI: 10.1016/j.foreco.2020.118833.
Leho Tedersoo, Vladimir Mikryukov, Sten Anslan, Mohammad Bahram, Abdul Nasir Khalid, Adriana Corrales, Ahto Agan, Aída‑M. Vasco‑Palacios, Alessandro Saitta, Alexandre Antonelli, Andrea C. Rinaldi, Annemieke Verbeken, Bobby P. Sulistyo, Boris Tamgnoue, Brendan Furneaux, Camila Duarte Ritter, Casper Nyamukondiwa, Cathy Sharp, César Marín, D. Q. Dai, Daniyal Gohar, Dipon Sharmah, Elisabeth Machteld Biersma, Erin K. Cameron, Eske De Crop, Eveli Otsing, Evgeny A. Davydov, Felipe E. Albornoz, Francis Q. Brearley, Franz Buegger, Genevieve Gates, Geofrey Zahn, Gregory Bonito, Indrek Hiiesalu, Inga Hiiesalu, Irma Zettur, Isabel C. Barrio, Jaan Pärn, Jacob Heilmann‑Clausen, Jelena Ankuda, John Y. Kupagme, Joosep Sarapuu, Jose G. Maciá‑Vicente, Joseph Djeugap Fovo, József Geml, Juha M. Alatalo, Julieta Alvarez‑Manjarrez, Jutamart Monkai, Kadri Põldmaa, Kadri Runnel, Kalev Adamson, Kari A. Bråthen, Karin Pritsch, Kassim I. Tchan, Kęstutis Armolaitis, Kevin D. Hyde, Kevin K. Newsham, Kristel Panksep, Lateef A. Adebola, Louis J. Lamit, Malka Saba, Marcela E. da Silva Cáceres, Maria Tuomi, Marieka Gryzenhout, Marijn Bauters, Miklós Bálint, Nalin Wijayawardene, Niloufar Hagh‑Doust, Nourou S. Yorou, Olavi Kurina, Peter E. Mortimer, Peter Meidl, R. Henrik Nilsson, Rasmus Puusepp, Rebeca Casique‑Valdés, Rein Drenkhan, Roberto Garibay‑Orijel, Roberto Godoy, Saleh Alfarraj, Saleh Rahimlou, Sergei Põlme, Sergey V. Dudov, Sunil Mundra, Talaat Ahmed, Tarquin Netherway, Terry W. Henkel, Tomas Roslinm, Vladimir E. Fedosov, Vladimir G. Onipchenko, W. A. Erandi Yasanthika, Young Woon Lim, Meike Piepenbring; Darta Klavina, Urmas Kõljalg, Kessy Abarenkov (2021). The Global Soil Mycobiome consortium dataset for boosting fungal diversity research. Fungal Diversity, 111, 573−588. DOI: 10.1007/s13225-021-00493-7.
Lõhmus, A.; Runnel, K.; Palo, A.; Leis, M.; Nellis, R.; Rannap, R.; Remm, L.; Rosenvald, R.; Lõhmus, P. (2021). Value of a broken umbrella: abandoned nest sites of the black stork (Ciconia nigra) host rich biodiversity. Biodiversity and Conservation, 30, 3647−3664. DOI: 10.1007/s10531-021-02268-7.
Runnel, Kadri; Drenkhan, Rein; Adamson, Kalev; Lõhmus, Piret; Rosenvald, Katrin; Rosenvald, Raul; Rähn, Elisabeth; Tedersoo, Leho (2021). The factors and scales shaping fungal assemblages in fallen spruce trunks: a DNA metabarcoding study. Forest Ecology and Management, 495 (119381), 119381. DOI: 10.1016/j.foreco.2021.119381.
Runnel, Kadri; Miettinen, Otto; Lõhmus, Asko (2021). Polypore fungi as a flagship group to indicate changes in biodiversity – a test case from Estonia. IMA Fungus, 12 (2). DOI: 10.1186/s43008-020-00050-y.
Runnel, Kadri; Stephan, Jörg G.; Jonsell, Mats; Kutser, Kadi; Lõhmus, Asko; Strengbom, Joachim; Tamm, Heidi; Ranius, Thomas (2021). Do different growth rates of trees cause distinct habitat qualities for saproxylic assemblages? Oecologia, 197 (3), 807−816. DOI: 10.1007/s00442-021-05061-z.
Saare, Linda; Rannap, Riinu (2021). Breeding behaviour of ectotherms at high latitudes: the case of the natterjack toad Epidalea calamita at its northern range limit. Behaviour, 1−20. DOI: 10.1163/1568539X-bja10134.
Saare, L., Laasmaa, A., Anslan, S., Rannap, R., Tedersoo L. (2021). Surveying for Batrachochytrium dendrobatidis and B. salamandrivorans in wild and captive amphibian populations in Estonia and Latvia. Diseases of aquatic organisms. 145: 101 - 109.
Vellak, Kai; Echrlich, Loore; Leis, Mare; Kupper, Tiiu; Kannukene, Leiti; Ingerpuu, Nele (2021). Additions to the Estonian Bryoflora 2019-2021: Liverworts and Mosses. Folia Cryptogamica Estonica, 58, 93−97. DOI: 10.12697/fce.2021.58.12 .
Vellak, Kai; Samson, Tiina; Rikka, Miina; Ingerpuu, Nele (2021). Above- and below-ground species richness of bryophytes in Estonian mires: diversity and differences. Journal of Bryology, 43 (3), 224−233. DOI: 10.1080/03736687.2021.1933324.
Suija, Ave; Jüriado, Inga; Lõhmus, Piret; Moisejevs, Rolands; Motiejūnaitė, Jurga; Tsurykau, Andrei; Kukwa, Martin (2020). Where the interesting species grow – remarkable records of lichens and lichenicolous fungi found during a Nordic Lichen Society meeting in Estonia. Folia Cryptogamica Estonica, 57, 73−84. DOI: 10.12697/fce.2020.57.09.
Bengtsson, Fia; Rydin, Håkan; Baltzer, Jennifer L.; Bragazza, Luca; Bu, Zhao‐Jun; Caporn, Simon J.M.; Dorrepaal, Ellen; Ivar Flatberg, Kjell; Galanina, Olga; Gałka, Mariusz; Ganeva, Anna; Goia, Irina; Goncharova, Nadezhda; Hájek, Michal; Haraguchi, Akira; Harris, Lorna I.; Humphreys, Elyn; Jiroušek, Martin; Kajukało, Katarzyna; Karofeld, Edgar ... ; Vellak, Kai; ... Granath, Gustaf (2020). Environmental drivers of Sphagnum growth in peatlands across the Holarctic region. Journal of Ecology, 109 (1). DOI: 10.1111/1365-2745.13499.
Ingerpuu, Nele; Vellak, Kai; Hagborg, Anders; Söderström, Lars (2020). The Angkor Wat Kingdom-liverworts from Cambodia. Nova Hedwigia Beiheft, 150, 293−316. DOI: 10.1127/nova-suppl/2020/293.
Java, O.; Kohv, M.; Lõhmus, A. (2020). Hydrological model for decision-making: Männikjärve Bog case study, Estonia. Baltic Journal of Modern Computing, 8 (3), 379−390. DOI: 10.22364/bjmc.2020.8.3.01.
Karofeld, E., Kaasik, A., Vellak, K. (2020). Growth characteristics of three Sphagnum species in restored extracted peatland. Restoration Ecology, 28 (6), 1574−1583. DOI: 10.1111/rec.13245 .
Lõhmus, Asko; Kont, Raido; Runnel, Kadri; Vaikre, Maarja; Remm, Liina (2020). Habitat models of focal species can link ecology and decision-making in sustainable forest management. Forests, 11. DOI: 10.3390/F11070721.
Põlme, Sergei; Abarenkov, Kessy; Henrik Nilsson, R.; Lindahl, Björn D.; Clemmensen, Karina Engelbrecht; Kauserud, Havard; Nguyen, Nhu; Kjøller, Rasmus; Bates, Scott T.; Baldrian, Petr; Frøslev, Tobias Guldberg; Adojaan, Kristjan; Vizzini, Alfredo; Suija, Ave; Pfister, Donald; Baral, Hans-Otto; Järv, Helle; Madrid, Hugo; Nordén, Jenni; Liu, Jian-Kui ... ; Runnel, Kadri; ...; Tedersoo, Leho (2020). FungalTraits: a user-friendly traits database of fungi and fungus-like stramenopiles. Fungal Diversity, 105 (1), 1−16. DOI: 10.1007/s13225-020-00466-2.
Rannap, Riinu; Kaart, Marta M.; Kaart, Tanel; Kill, Keit; Uuemaa, Evelyn; Mander, Ülo; Kasak, Kuno (2020). Constructed wetlands as potential breeding sites for amphibians in agricultural landscapes: A case study. Ecological Engineering, 158, 106077. DOI: 10.1016/j.ecoleng.2020.106077.
Rosenvald, Raul; Rosenvald, Katrin; Kaart, Tanel; Soolmann, Erko (2020). Effects of stand parameters on conifer regeneration success in pine shelterwood stands in Estonia. European Journal of Forest Research, 139 (1), 29−40. DOI: 10.1007/s10342-019-01255-6.
Runnel, Kadri; Sell, Indrek; Lõhmus, Asko (2020). Recovery of the Critically Endangered bracket fungus Amylocystis lapponica in the Estonian network of strictly protected forests. Oryx, 54, 478−482. DOI: 10.1017/S0030605319000334.
Tedersoo, Leho; Anslan, Sten; Bahram, Mohammad; Drenkhan, Rein; Pritsch, Karin; Buegger, Franz; Padari, Allar; Hagh-Doust, Niloufar; Mikryukov, Vladimir; Gohar, Daniyal; Amiri, Rasekh; Hiiesalu, Indrek; Lutter, Reimo; Rosenvald, Raul; Rähn, Elisabeth; Adamson, Kalev; Drenkhan, Tiia; Tullus, Hardi; Jürimaa, Katrin; Sibul, Ivar ... Abarenkov, Kessy (2020). Regional-Scale In-Depth Analysis of Soil Fungal Diversity Reveals Strong pH and Plant Species Effects in Northern Europe. Frontiers in Microbiology, 11, ARTN 1953. DOI: 10.3389/fmicb.2020.01953.
Vaikre, M., Remm, L., Rannap, R. (2020). Forest ditch maintenance impoverishes the fauna of aquatic invertebrates: Opportunities for mitigation. Journal of Environmental Management, 274. DOI: 10.1016/j.jenvman.2020.111188.
Lõhmus, Piret; Lõhmus, Asko (2019). The Potential of Production Forests for Sustaining Lichen Diversity: A Perspective on Sustainable Forest Management. Forests, 10 (12), ARTN 1063. DOI: 10.3390/f10121063.
Lõhmus, Piret; Marmor, Liis; Jüriado, Inga; Suija, Ave; Oja, Ede; Degtjarenko, Polina; Randlane, Tiina (2019). Red List of Estonian lichens: revision in 2019. Folia Cryptogamica Estonica, 56, 63−76. DOI: 10.12697/fce.2019.56.07.
Moisejevs, R.; Motiejūnaitė, J.; Lõhmus, P. (2019). Lichen assemblages on Scots pine stumps and fine woody debris in hemiboreal post-harvest sites: the impact of site age and green tree retention. Nova Hedwigia, 109 (1-2), 247−266. DOI: 10.1127/nova_hedwigia/2019/0533.
Remm, Liina; Lõhmus, Asko; Leibak, Eerik; Kohv, Marko; Salm, Jüri-Ott; Lõhmus, Piret; Rosenvald, Raul; Runnel, Kadri; Vellak, Kai; Rannap, Riinu (2019). Restoration dilemmas between future ecosystem and current species values: The concept and a practical approach in Estonian mires. Journal of Environmental Management, 250, UNSP 109439. DOI: 10.1016/j.jenvman.2019.109439.
Rosenvald, Raul; Lohmus, Piret; Rannap, Riinu; Remm, Liina; Rosenvald, Katrin; Runnel, Kadri; Lohmus, Asko (2019). Assessing long-term effectiveness of green-tree retention. Forest Ecology and Management, 448, 543−548. DOI: 10.1016/j.foreco.2019.06.034.
Asko Lõhmus, Herdis Fridolin, Agu Leivits, Kristjan Tõnisson, Riinu Rannap (2019). Prioritizing research gaps for national conservation management and policy: the managers’ perspective in Estonia. Biodiversity and Conservation, 28, 2565−2579. DOI: 10.1007/s10531-019-01779-8.
Ingerpuu, Nele; Kupper, Tiiu; Vellak, Kai; Kupper, Priit; Sõber, Jaak; Tullus, Arvo; Zobel, Martin; Liira, Jaan (2019). Response of bryophytes to afforestation, increase of air humidity, and enrichment of soil diaspore bank. Forest Ecology and Management, 432, 64−72. DOI: 10.1016/j.foreco.2018.09.004.
Kaasiku, Triin; Rannap, Riinu; Kaart, Tanel (2019). Managing coastal grasslands for an endangered wader species can give positive results only when expanding the area of open landscape. Journal for nature conservation, 48, 12−19. DOI: 10.1016/j.jnc.2018.12.004.
Lõhmus, Piret; Lõhmus, Asko (2019). The Potential of Production Forests for Sustaining Lichen Diversity: A Perspective on Sustainable Forest Management. Forests, 10 (12), ARTN 1063. DOI: 10.3390/f10121063.
Magnus, Riin; Rannap, Riinu (2019). Pond construction for threatened amphibians is an important conservation tool, even in landscapes with extant natural water bodies. Wetlands Ecology and Management, 27, 323−341. DOI: 10.1007/s11273-019-09662-7.
Põldmaa, Kadri; Spirin, Viacheslav; Miettinen, Otto; Runnel, Kadri; Savchenko, Anton; Pärtel, Kadri; Kõljalg, Urmas (2019). Fungi from Soomaa National Park: rarities and species new for Estonia. Folia Cryptogamica Estonica, 56, 127−136. DOI: 10.12697/fce.2019.56.13.
Remm, Liina; Lõhmus, Asko; Leibak, Eerik; Kohv, Marko; Salm, Jüri-Ott; Lõhmus, Piret; Rosenvald, Raul; Runnel, Kadri; Vellak, Kai; Rannap, Riinu (2019). Restoration dilemmas between future ecosystem and current species values: The concept and a practical approach in Estonian mires. Journal of Environmental Management, 250, UNSP 109439. DOI: 10.1016/j.jenvman.2019.109439.
Rosenvald, Raul; Lohmus, Piret; Rannap, Riinu; Remm, Liina; Rosenvald, Katrin; Runnel, Kadri; Lohmus, Asko (2019). Assessing long-term effectiveness of green-tree retention. Forest Ecology and Management, 448, 543−548. DOI: 10.1016/j.foreco.2019.06.034.
Runnel, Kadri; Spirin, Viacheslav; Miettinen, Otto; Vlasak, Josef; Dai, Yu-Cheng; Ryvarden, Leif; Larsson, Karl-Henrik (2019). Morphological plasticity in brown-rot fungi: Antrodia is redefined to encompass both poroid and corticioid species. Mycologia, 111 (5), 871−883. DOI: 10.1080/00275514.2019.1640532.
Sandstrom, J.; Bernes, C.; Junninen, K.; Lõhmus, A.; Macdonald, E.; Müller, J.; Jonsson, B.G. (2019). Impacts of dead wood manipulation on the biodiversity of temperate and boreal forests. A systematic review. Journal of Applied Ecology, 56 (7), 1770−1781. DOI: 10.1111/1365-2664.13395.
Šavrak, Anna-Liisa; Remm, Liina; Lõhmus, Asko (2019). Retention trees can benefit biodiversity without significant long-term reduction in stand regeneration in Estonian mixed forests. European Journal of Forest Research, 138 (3), 513−525. DOI: 10.1007/s10342-019-01187-1.
Tullus, T.; Tishler, M.; Rosenvald, R.; Tullus, A.; Lutter, R.; Tullus, H. (2019). Early responses of vascular plant and bryophyte communities to uniform shelterwood cutting in hemiboreal Scots pine forests. Forest Ecology and Management, 440, 70−78. DOI: 10.1016/j.foreco.2019.03.009.
Vellak, K., Caparros Callejo, R., Ingerpuu, N., Leis, M., Ehrlich, L., Kupper, T. (2019). Additions and amendments to the list of Estonian bryophytes. Folia Cryptogamica Estonica, 56, 1−5. DOI: 10.12697/fce.2019.56.01.
Degtjarenko, P.; Jüriado, I.; Lõhmus, P; (2018). New Estonian records: Lichenized fungi. Folia Cryptogamica Estonica, 55, 151−154. DOI: 10.12697/fce.2018.55.15.
Lõhmus, Asko; Lõhmus, Piret; Runnel, Kadri (2018). A simple survey protocol for assessing terrestrial biodiversity in a broad range of ecosystems. PLoS ONE. DOI: 10.1371/journal.pone.0208535.
Lõhmus, P.; Lõhmus, A.; Hämäläinen, A. (2018). Rapid legacy-dependent succession of lichen assemblages after forest fires: insights from two boreal regions. Journal of Vegetation Science, 29 (2), 200−212. DOI: 10.1111/jvs.12600.
Tullus, T.; Rosenvald, R.; Leis, M.; Lõhmus, P. (2018). Impacts of shelterwood logging on forest bryoflora: Distinct assemblages with richness comparable to mature forests. Forest Ecology and Management, 411, 67−74. DOI: 10.1016/j.foreco.2018.01.008.
Bernes, C.; Macura, B.; Jonsson, B.G.; Junninen, K.; Müller, J.; Sandström, J.; Lõhmus, A.; Macdonald, E. (2018). Manipulating ungulate herbivory in temperate and boreal forests: impacts on vegetation and invertebrates. A systematic review. Environmental Evidence, 7 (13). DOI: 10.1186/s13750-018-0125-3.
Granath, G.; Rydin, H.; Baltzer, J.L.; Bengtsson, F.; Boncek, N.; Bragazza, L.; Bu. C.-J.; Caporn, S. J. M.; Dorrepaal, E.; Galanina, O.; Gałka, M.; Ganeva, A.; Gillikin, D.P.; Goia, I.; Goncharova, N.; Hájek, M.; Haraguchi, A.; Harris, L.I.; Humphreys, E.; Jiroušek, M. ... ; Vellak, K; ... Rice, S.K. (2018). Environmental and taxonomic controls of carbon and oxygen stable isotope composition in Sphagnum across broad climatic and geographic ranges. Biogeosciences, 15, 5189−5202. DOI: 10.5194/bg-15-5189-2018.
Ingerpuu, N., Vellak, K. (2018). Are viable diaspores valid members of the local bryophyte flora? Journal of Bryology, 40 (2), 193−195. DOI: 10.1080/03736687.2018.1446772.
Ingerpuu, N., Vellak, K., Ehrlich, L. (2018). Revised red data list of Estonian bryophytes. Folia Cryptogamica Estonica, 55, 97−104. DOI: 10.12697/fce.2018.55.10.
Kučera, J., Blockeel, T.L., Erzberger, P., Papp, B., Soldan, Z., Vellak, K., Werner, O., Ros, R.M. (2018). The Didymodon tophaceus complex (Pottiaceae, Bryophyta) revisited: new data support the subspecific rank of currently recognized species. Cryptogamie Bryologie Lichenologie, 39 (2), 241−257. DOI: 10.7872/cryb/v39.iss2.2018.241.
Lõhmus, Asko; Lõhmus, Piret; Runnel, Kadri (2018). A simple survey protocol for assessing terrestrial biodiversity in a broad range of ecosystems. PLoS ONE. DOI: 10.1371/journal.pone.0208535.
Lõhmus, Asko; Runnel, Kadri (2018). Assigning indicator taxa based on assemblage patterns: beware of the effort and the objective! Biological Conservation, 219, 147−152. DOI: 10.1016/j.biocon.2018.01.023.
Lõhmus, Asko; Vunk, Eike; Runnel, Kadri (2018). Conservation management for forest fungi in Estonia: the case of polypores. Folia Cryptogamica Estonica, 55, 79−89. DOI: 10.12697/fce.2018.55.08.
Lõhmus, P.; Lõhmus, A.; Hämäläinen, A. (2018). Rapid legacy-dependent succession of lichen assemblages after forest fires: insights from two boreal regions. Journal of Vegetation Science, 29 (2), 200−212. DOI: 10.1111/jvs.12600.
Oja, R.; Pass, E.; Soe, E.; Ligi, K.; Anijalg, P.; Laurimaa, L.; Saarma, U.; Lõhmus, A.; Valdmann, H. (2018). Increased nest predation near protected capercaillie leks: a caveat against small reserves. European Journal of Wildlife Research, 64 (6). DOI: 10.1007/s10344-018-1165-2.
Remm, Liina; Rünkla, Mihkel; Lõhmus, Asko (2018). How bilberry pickers use Estonian forests: implications for sustaining a non-timber value. BALTIC FORESTRY, 24 (2), 287−295.
Remm, Liina; Sushko, Gennadi (2018). Dragonfly fauna in rewetted mires in Belarus: diverse but different from natural sites. Wetlands Ecology and Management, 26 (6), 1173−1180.10.1007/s11273-018-9625-8.
Remm, Liina; Vaikre, Maarja; Rannap, Riinu; Kohv, Marko (2018). Amphibians in drained forest landscapes: Conservation opportunities for commercial forests and protected sites. Forest Ecology and Management, 428, 87−92. DOI: 10.1016/j.foreco.2018.06.038.
Rosenvald, Raul; Tullus, Hardi; Lõhmus, Asko (2018). Is shelterwood harvesting preferable over clear-cutting for sustaining deadwood pools? The case of Estonian conifer forests. Forest Ecology and Management, 429, 375−383. DOI: 10.1016/j.foreco.2018.07.026.
Runnel, Kadri; Järve, Sulev; Lõhmus, Asko (2018). A lesson in urban mycology: Critically Endangered polypore Trametes suaveolens (Basidiomycota) re-discovered in Estonia. Folia Cryptogamica Estonica, 55, 91−95. DOI: 10.12697/fce.2018.55.09.
Triisberg-Uljas, T, Vellak, K, Karofeld, E (2018). Application of oil-shale ash and straw mulch promotes the revegetation of extracted peatlands. Ecological Engineering, 110, 99−106. DOI: 10.1016/j.ecoleng.2017.10.006.
Tullus, T.; Rosenvald, R.; Leis, M.; Lõhmus, P. (2018). Impacts of shelterwood logging on forest bryoflora: Distinct assemblages with richness comparable to mature forests. Forest Ecology and Management, 411, 67−74. DOI: 10.1016/j.foreco.2018.01.008.
Vaikre, Maarja; Remm, Liina; Rannap, Riinu; Voode, Margus (2018). Functional Assemblages of Macroinvertebrates in Pools and Ditches in Drained Forest Landscape. Wetlands, 38 (5), 957−964. DOI: 10.1007/s13157-018-1045-2.